logoSmall RNA from different tissues of two rat strains.


Mapping

Table
Library information and mapping to the genome
lib IDdescriptionAcceptedNonmatchingPerfectTrimmed 3 onlyMapped to genomeMapped non-redundant readsMapped loci
T1S1tissue 1, strain 19692054580881296337329198693883242250247655078
T1S2tissue 1, strain 26660899368771278984021833472973187152774413118
T2S1tissue 2, strain 15999964354052160921518502282459443181696562108
T2S2tissue 2, strain 25272333303190048632117541122240433128892420217
T3S1tissue 3, strain 15706022305256163495920185022653461141598602910
T3S2tissue 3, strain 24716095284764148581313826411868454136922538301
T4S1tissue 4, strain 15006236312073847775914077391885498106659340967
T4S2tissue 4, strain 27681065475220874904121798162928857157067410365
T5S1tissue 5, strain 14797617258621067550015359072211407196275640584
T5S2tissue 5, strain 25225582301461469283115181372210968125883411698
Comment:
For genome mapping the following matches were accepted:

Perfect: the complete read perfectly matches to the genome.
Trimmed 3 only: the best hits has at least 18 bases perfectly matching to the genome, and the remaining 3' seqeunce is trimmed.

©2008 InteRNA Genomics B.V.